STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN22283.1Hypothetical protein. (652 aa)    
Predicted Functional Partners:
SDN21995.1
alpha-N-arabinofuranosidase.
 
   
 0.770
SDN08727.1
alpha-N-arabinofuranosidase.
 
   
 0.761
SDN22172.1
Alpha galactosidase A.
 
     0.753
SDN22398.1
Uncharacterized membrane protein YesL.
 
     0.683
SDN22310.1
Putative aldouronate transport system substrate-binding protein.
 
     0.671
SDN22369.1
Putative aldouronate transport system permease protein.
 
     0.610
SDN22339.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
       0.580
SDM66539.1
alpha-L-rhamnosidase.
  
     0.559
SDM66397.1
alpha-L-rhamnosidase.
  
     0.553
SDM66633.1
alpha-L-rhamnosidase.
  
     0.546
Your Current Organism:
Actinomyces ruminicola
NCBI taxonomy Id: 332524
Other names: A. ruminicola, Actinomyces ruminicola An et al. 2006 emend. Nouioui et al. 2018, CGMCC 1.5030, DSM 27982, JCM 13352, strain B71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.