STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFLA_078050Cytochrome P450 monooxygenase, putative; Belongs to the cytochrome P450 family. (456 aa)    
Predicted Functional Partners:
AFLA_064380
Uncharacterized protein.
      
 0.597
AFLA_064590
O-methyltransferase, putative.
      
 0.597
AFLA_130330
RNA polymerase II holoenzyme complex component Rgr1.
    
 0.428
AFLA_055170
Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery.
    
 0.422
AFLA_107260
Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery.
    
 0.420
AFLA_058970
Cytochrome P450, putative; Belongs to the cytochrome P450 family.
  
   0.407
AFLA_096750
Cytochrome P450, putative; Belongs to the cytochrome P450 family.
  
     0.401
Your Current Organism:
Aspergillus flavus
NCBI taxonomy Id: 332952
Other names: A. flavus NRRL3357, Aspergillus flavus NRRL3357
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