STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFLA_034910ER membrane protein (Pkr1), putative. (185 aa)    
Predicted Functional Partners:
AFLA_093800
Small nuclear ribonucleoprotein Sm D2.
   
 0.979
AFLA_078960
Small nuclear ribonucleoprotein G.
   
 0.978
AFLA_076940
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.976
AFLA_012170
U5 snRNP component Snu114, putative.
   
 0.947
AFLA_052230
U1 snRNP complex component Yhc1, putative.
   
 0.946
AFLA_132080
Small nuclear ribonucleoprotein U2, A.
   
 0.940
AFLA_133000
Pre-mRNA splicing factor (Prp8), putative.
   
 0.933
AFLA_026260
Small nuclear ribonucleoprotein Sm D3.
   
 0.930
AFLA_026270
Uncharacterized protein.
   
 0.930
AFLA_094660
U1 small nuclear ribonucleoprotein 70 kDa.
   
 0.927
Your Current Organism:
Aspergillus flavus
NCBI taxonomy Id: 332952
Other names: A. flavus NRRL3357, Aspergillus flavus NRRL3357
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.