STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK18451.1Iron complex transport system ATP-binding protein. (259 aa)    
Predicted Functional Partners:
SEK18435.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.999
SEK18423.1
Iron complex transport system substrate-binding protein.
 
 0.998
SEK76917.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.996
SEL31999.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.996
SEL58651.1
Iron complex transport system substrate-binding protein.
 
 0.976
SEK76865.1
Iron complex transport system substrate-binding protein.
 
 0.850
SEL32049.1
Iron complex transport system substrate-binding protein.
 
 0.841
SEK18409.1
Lactonase, 7-bladed beta-propeller.
 
    0.714
SEK18394.1
40-residue YVTN family beta-propeller repeat-containing protein.
 
    0.640
SEK18465.1
Uncharacterized membrane protein.
       0.610
Your Current Organism:
Parapedobacter koreensis
NCBI taxonomy Id: 332977
Other names: KCTC 12643, LMG 23493, LMG:23493, P. koreensis, Parapedobacter koreensis Kim et al. 2007, Pedobacter sp. WPCB189, strain Jip14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.