Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK17967.1 | SEK64757.1 | SAMN05421740_10156 | SAMN05421740_102330 | DNA polymerase-3 subunit alpha. | HD domain-containing protein. | 0.496 |
SEK18599.1 | SEK64757.1 | SAMN05421740_101107 | SAMN05421740_102330 | Gliding motility-associated lipoprotein GldJ. | HD domain-containing protein. | 0.492 |
SEK18599.1 | ribBA | SAMN05421740_101107 | SAMN05421740_10791 | Gliding motility-associated lipoprotein GldJ. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.515 |
SEK20381.1 | SEK64757.1 | SAMN05421740_101201 | SAMN05421740_102330 | Peroxiredoxin. | HD domain-containing protein. | 0.440 |
SEK21466.1 | SEK64757.1 | SAMN05421740_101237 | SAMN05421740_102330 | Hypothetical protein. | HD domain-containing protein. | 0.518 |
SEK64697.1 | SEK64729.1 | SAMN05421740_102328 | SAMN05421740_102329 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SEK64697.1 | SEK64757.1 | SAMN05421740_102328 | SAMN05421740_102330 | Hypothetical protein. | HD domain-containing protein. | 0.664 |
SEK64697.1 | SEK64788.1 | SAMN05421740_102328 | SAMN05421740_102331 | Hypothetical protein. | Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains. | 0.611 |
SEK64729.1 | SEK64697.1 | SAMN05421740_102329 | SAMN05421740_102328 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SEK64729.1 | SEK64757.1 | SAMN05421740_102329 | SAMN05421740_102330 | Hypothetical protein. | HD domain-containing protein. | 0.664 |
SEK64729.1 | SEK64788.1 | SAMN05421740_102329 | SAMN05421740_102331 | Hypothetical protein. | Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains. | 0.611 |
SEK64757.1 | SEK17967.1 | SAMN05421740_102330 | SAMN05421740_10156 | HD domain-containing protein. | DNA polymerase-3 subunit alpha. | 0.496 |
SEK64757.1 | SEK18599.1 | SAMN05421740_102330 | SAMN05421740_101107 | HD domain-containing protein. | Gliding motility-associated lipoprotein GldJ. | 0.492 |
SEK64757.1 | SEK20381.1 | SAMN05421740_102330 | SAMN05421740_101201 | HD domain-containing protein. | Peroxiredoxin. | 0.440 |
SEK64757.1 | SEK21466.1 | SAMN05421740_102330 | SAMN05421740_101237 | HD domain-containing protein. | Hypothetical protein. | 0.518 |
SEK64757.1 | SEK64697.1 | SAMN05421740_102330 | SAMN05421740_102328 | HD domain-containing protein. | Hypothetical protein. | 0.664 |
SEK64757.1 | SEK64729.1 | SAMN05421740_102330 | SAMN05421740_102329 | HD domain-containing protein. | Hypothetical protein. | 0.664 |
SEK64757.1 | SEK64788.1 | SAMN05421740_102330 | SAMN05421740_102331 | HD domain-containing protein. | Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains. | 0.970 |
SEK64757.1 | SEK93574.1 | SAMN05421740_102330 | SAMN05421740_10330 | HD domain-containing protein. | Chemotaxis protein MotB. | 0.575 |
SEK64757.1 | pnp | SAMN05421740_102330 | SAMN05421740_108107 | HD domain-containing protein. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.448 |
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