Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEL13195.1 | SEL13217.1 | SAMN05421740_103598 | SAMN05421740_103599 | Isoquinoline 1-oxidoreductase, beta subunit. | Cysteine desulfurase. | 0.785 |
SEL13195.1 | SEL13246.1 | SAMN05421740_103598 | SAMN05421740_103600 | Isoquinoline 1-oxidoreductase, beta subunit. | CTP:molybdopterin cytidylyltransferase MocA. | 0.969 |
SEL13195.1 | SEL13281.1 | SAMN05421740_103598 | SAMN05421740_103601 | Isoquinoline 1-oxidoreductase, beta subunit. | Cyclic pyranopterin monophosphate synthase subunit MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. | 0.770 |
SEL13195.1 | SEL13314.1 | SAMN05421740_103598 | SAMN05421740_103602 | Isoquinoline 1-oxidoreductase, beta subunit. | Oxidoreductase molybdopterin binding domain-containing protein. | 0.688 |
SEL13195.1 | SEL13343.1 | SAMN05421740_103598 | SAMN05421740_103603 | Isoquinoline 1-oxidoreductase, beta subunit. | Molybdopterin molybdochelatase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family. | 0.768 |
SEL13195.1 | SEL13381.1 | SAMN05421740_103598 | SAMN05421740_103604 | Isoquinoline 1-oxidoreductase, beta subunit. | Hypothetical protein. | 0.699 |
SEL13195.1 | SEL13414.1 | SAMN05421740_103598 | SAMN05421740_103605 | Isoquinoline 1-oxidoreductase, beta subunit. | Molybdopterin synthase subunit MoaD. | 0.722 |
SEL13195.1 | SEL13447.1 | SAMN05421740_103598 | SAMN05421740_103606 | Isoquinoline 1-oxidoreductase, beta subunit. | Molybdopterin synthase catalytic subunit. | 0.735 |
SEL13195.1 | SEL13473.1 | SAMN05421740_103598 | SAMN05421740_103607 | Isoquinoline 1-oxidoreductase, beta subunit. | Cyclic pyranopterin monophosphate synthase subunit MoaC. | 0.758 |
SEL13217.1 | SEL13195.1 | SAMN05421740_103599 | SAMN05421740_103598 | Cysteine desulfurase. | Isoquinoline 1-oxidoreductase, beta subunit. | 0.785 |
SEL13217.1 | SEL13246.1 | SAMN05421740_103599 | SAMN05421740_103600 | Cysteine desulfurase. | CTP:molybdopterin cytidylyltransferase MocA. | 0.718 |
SEL13217.1 | SEL13281.1 | SAMN05421740_103599 | SAMN05421740_103601 | Cysteine desulfurase. | Cyclic pyranopterin monophosphate synthase subunit MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. | 0.741 |
SEL13217.1 | SEL13314.1 | SAMN05421740_103599 | SAMN05421740_103602 | Cysteine desulfurase. | Oxidoreductase molybdopterin binding domain-containing protein. | 0.727 |
SEL13217.1 | SEL13343.1 | SAMN05421740_103599 | SAMN05421740_103603 | Cysteine desulfurase. | Molybdopterin molybdochelatase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family. | 0.718 |
SEL13217.1 | SEL13381.1 | SAMN05421740_103599 | SAMN05421740_103604 | Cysteine desulfurase. | Hypothetical protein. | 0.702 |
SEL13217.1 | SEL13414.1 | SAMN05421740_103599 | SAMN05421740_103605 | Cysteine desulfurase. | Molybdopterin synthase subunit MoaD. | 0.805 |
SEL13217.1 | SEL13447.1 | SAMN05421740_103599 | SAMN05421740_103606 | Cysteine desulfurase. | Molybdopterin synthase catalytic subunit. | 0.698 |
SEL13217.1 | SEL13473.1 | SAMN05421740_103599 | SAMN05421740_103607 | Cysteine desulfurase. | Cyclic pyranopterin monophosphate synthase subunit MoaC. | 0.755 |
SEL13217.1 | SEL74522.1 | SAMN05421740_103599 | SAMN05421740_109113 | Cysteine desulfurase. | Adenylyltransferase and sulfurtransferase. | 0.888 |
SEL13246.1 | SEL13195.1 | SAMN05421740_103600 | SAMN05421740_103598 | CTP:molybdopterin cytidylyltransferase MocA. | Isoquinoline 1-oxidoreductase, beta subunit. | 0.969 |
page 1 of 6