Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEK72186.1 | SEL14690.1 | SAMN05421740_102515 | SAMN05421740_103645 | AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase. | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.942 |
| SEK72186.1 | rpoA | SAMN05421740_102515 | SAMN05421740_101689 | AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.458 |
| SEK72946.1 | SEL14690.1 | SAMN05421740_102534 | SAMN05421740_103645 | DNA-binding transcriptional regulator, MerR family. | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.963 |
| SEK72946.1 | SEL42624.1 | SAMN05421740_102534 | SAMN05421740_105163 | DNA-binding transcriptional regulator, MerR family. | RNA polymerase Rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.966 |
| SEK72946.1 | rpoA | SAMN05421740_102534 | SAMN05421740_101689 | DNA-binding transcriptional regulator, MerR family. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.957 |
| SEK72946.1 | rpoB | SAMN05421740_102534 | SAMN05421740_101575 | DNA-binding transcriptional regulator, MerR family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.962 |
| SEK72946.1 | rpoC | SAMN05421740_102534 | SAMN05421740_101574 | DNA-binding transcriptional regulator, MerR family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.959 |
| SEL14690.1 | SEK72186.1 | SAMN05421740_103645 | SAMN05421740_102515 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase. | 0.942 |
| SEL14690.1 | SEK72946.1 | SAMN05421740_103645 | SAMN05421740_102534 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-binding transcriptional regulator, MerR family. | 0.963 |
| SEL14690.1 | SEL42624.1 | SAMN05421740_103645 | SAMN05421740_105163 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | RNA polymerase Rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.972 |
| SEL14690.1 | SEL70409.1 | SAMN05421740_103645 | SAMN05421740_108229 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Transcriptional regulator, AraC family. | 0.956 |
| SEL14690.1 | SEL72942.1 | SAMN05421740_103645 | SAMN05421740_10929 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | AraC-like ligand binding domain-containing protein. | 0.955 |
| SEL14690.1 | SEL90753.1 | SAMN05421740_103645 | SAMN05421740_11337 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Transcriptional regulator, Spx/MgsR family; Belongs to the ArsC family. | 0.953 |
| SEL14690.1 | nusA | SAMN05421740_103645 | SAMN05421740_103319 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.964 |
| SEL14690.1 | rpoA | SAMN05421740_103645 | SAMN05421740_101689 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.990 |
| SEL14690.1 | rpoB | SAMN05421740_103645 | SAMN05421740_101575 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.988 |
| SEL14690.1 | rpoC | SAMN05421740_103645 | SAMN05421740_101574 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.985 |
| SEL42624.1 | SEK72946.1 | SAMN05421740_105163 | SAMN05421740_102534 | RNA polymerase Rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | DNA-binding transcriptional regulator, MerR family. | 0.966 |
| SEL42624.1 | SEL14690.1 | SAMN05421740_105163 | SAMN05421740_103645 | RNA polymerase Rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.972 |
| SEL42624.1 | SEL70409.1 | SAMN05421740_105163 | SAMN05421740_108229 | RNA polymerase Rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | Transcriptional regulator, AraC family. | 0.955 |
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