Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK31830.1 | SEL14889.1 | SAMN05421740_101529 | SAMN05421740_103651 | Dihydrodipicolinate reductase; Belongs to the DapB family. | Aspartate kinase; Belongs to the aspartokinase family. | 0.634 |
SEK31830.1 | SEL58714.1 | SAMN05421740_101529 | SAMN05421740_10771 | Dihydrodipicolinate reductase; Belongs to the DapB family. | Aspartate kinase. | 0.701 |
SEK31830.1 | SEL87093.1 | SAMN05421740_101529 | SAMN05421740_11228 | Dihydrodipicolinate reductase; Belongs to the DapB family. | Aspartate kinase; Belongs to the aspartokinase family. | 0.635 |
SEK31830.1 | asd | SAMN05421740_101529 | SAMN05421740_109217 | Dihydrodipicolinate reductase; Belongs to the DapB family. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.753 |
SEK31830.1 | dapF | SAMN05421740_101529 | SAMN05421740_107120 | Dihydrodipicolinate reductase; Belongs to the DapB family. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.661 |
SEK31830.1 | lysA | SAMN05421740_101529 | SAMN05421740_103652 | Dihydrodipicolinate reductase; Belongs to the DapB family. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.814 |
SEK34905.1 | glpK | SAMN05421740_101622 | SAMN05421740_103367 | Trypsin-like peptidase domain-containing protein. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.937 |
SEK34905.1 | lysA | SAMN05421740_101622 | SAMN05421740_103652 | Trypsin-like peptidase domain-containing protein. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.859 |
SEL02617.1 | lysA | SAMN05421740_103274 | SAMN05421740_103652 | Modulator of drug activity B. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.882 |
SEL14889.1 | SEK31830.1 | SAMN05421740_103651 | SAMN05421740_101529 | Aspartate kinase; Belongs to the aspartokinase family. | Dihydrodipicolinate reductase; Belongs to the DapB family. | 0.634 |
SEL14889.1 | SEL58714.1 | SAMN05421740_103651 | SAMN05421740_10771 | Aspartate kinase; Belongs to the aspartokinase family. | Aspartate kinase. | 0.934 |
SEL14889.1 | SEL87093.1 | SAMN05421740_103651 | SAMN05421740_11228 | Aspartate kinase; Belongs to the aspartokinase family. | Aspartate kinase; Belongs to the aspartokinase family. | 0.868 |
SEL14889.1 | asd | SAMN05421740_103651 | SAMN05421740_109217 | Aspartate kinase; Belongs to the aspartokinase family. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.984 |
SEL14889.1 | dapF | SAMN05421740_103651 | SAMN05421740_107120 | Aspartate kinase; Belongs to the aspartokinase family. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.577 |
SEL14889.1 | lysA | SAMN05421740_103651 | SAMN05421740_103652 | Aspartate kinase; Belongs to the aspartokinase family. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.983 |
SEL14889.1 | murE | SAMN05421740_103651 | SAMN05421740_104293 | Aspartate kinase; Belongs to the aspartokinase family. | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.544 |
SEL58714.1 | SEK31830.1 | SAMN05421740_10771 | SAMN05421740_101529 | Aspartate kinase. | Dihydrodipicolinate reductase; Belongs to the DapB family. | 0.701 |
SEL58714.1 | SEL14889.1 | SAMN05421740_10771 | SAMN05421740_103651 | Aspartate kinase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.934 |
SEL58714.1 | SEL87093.1 | SAMN05421740_10771 | SAMN05421740_11228 | Aspartate kinase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.928 |
SEL58714.1 | asd | SAMN05421740_10771 | SAMN05421740_109217 | Aspartate kinase. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.998 |
page 1 of 3