STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK95460.1Beta-glucosidase. (447 aa)    
Predicted Functional Partners:
SEL32636.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
 
 0.903
SEK37076.1
Carbohydrate binding module (family 6); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.858
SEK95423.1
Conserved hypothetical protein.
 
     0.857
SEK37039.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
    
 0.763
SEK40842.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
    
 0.763
SEK29345.1
Ribose 5-phosphate isomerase B.
  
 
 0.692
SEL75528.1
Ribose 5-phosphate isomerase B.
  
 
 0.692
SEL84127.1
Ribose-5-phosphate isomerase.
  
 
 0.692
SEL73153.1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
  
 0.669
SEL78525.1
Alpha-glucosidase.
 
 
 0.664
Your Current Organism:
Parapedobacter koreensis
NCBI taxonomy Id: 332977
Other names: KCTC 12643, LMG 23493, LMG:23493, P. koreensis, Parapedobacter koreensis Kim et al. 2007, Pedobacter sp. WPCB189, strain Jip14
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