Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK72801.1 | SEK92523.1 | SAMN05421740_102530 | SAMN05421740_1032 | DNA processing protein. | Competence protein ComEC. | 0.903 |
SEK72801.1 | SEL46066.1 | SAMN05421740_102530 | SAMN05421740_105315 | DNA processing protein. | Magnesium chelatase family protein. | 0.852 |
SEK72801.1 | SEL49635.1 | SAMN05421740_102530 | SAMN05421740_10631 | DNA processing protein. | comF family protein. | 0.916 |
SEK72801.1 | SEL50353.1 | SAMN05421740_102530 | SAMN05421740_10661 | DNA processing protein. | Putative endonuclease; Belongs to the UPF0102 family. | 0.625 |
SEK72801.1 | SEL84668.1 | SAMN05421740_102530 | SAMN05421740_11192 | DNA processing protein. | DNA repair protein RadC; Belongs to the UPF0758 family. | 0.684 |
SEK92523.1 | SEK72801.1 | SAMN05421740_1032 | SAMN05421740_102530 | Competence protein ComEC. | DNA processing protein. | 0.903 |
SEK92523.1 | SEL46066.1 | SAMN05421740_1032 | SAMN05421740_105315 | Competence protein ComEC. | Magnesium chelatase family protein. | 0.752 |
SEK92523.1 | SEL49635.1 | SAMN05421740_1032 | SAMN05421740_10631 | Competence protein ComEC. | comF family protein. | 0.904 |
SEK92523.1 | SEL50353.1 | SAMN05421740_1032 | SAMN05421740_10661 | Competence protein ComEC. | Putative endonuclease; Belongs to the UPF0102 family. | 0.587 |
SEK92523.1 | SEL52282.1 | SAMN05421740_1032 | SAMN05421740_106149 | Competence protein ComEC. | PAS domain S-box-containing protein. | 0.594 |
SEK92523.1 | SEL84668.1 | SAMN05421740_1032 | SAMN05421740_11192 | Competence protein ComEC. | DNA repair protein RadC; Belongs to the UPF0758 family. | 0.473 |
SEL05283.1 | SEL49635.1 | SAMN05421740_103339 | SAMN05421740_10631 | Prephenate dehydrogenase. | comF family protein. | 0.787 |
SEL05283.1 | apt | SAMN05421740_103339 | SAMN05421740_11293 | Prephenate dehydrogenase. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.778 |
SEL46066.1 | SEK72801.1 | SAMN05421740_105315 | SAMN05421740_102530 | Magnesium chelatase family protein. | DNA processing protein. | 0.852 |
SEL46066.1 | SEK92523.1 | SAMN05421740_105315 | SAMN05421740_1032 | Magnesium chelatase family protein. | Competence protein ComEC. | 0.752 |
SEL46066.1 | SEL49635.1 | SAMN05421740_105315 | SAMN05421740_10631 | Magnesium chelatase family protein. | comF family protein. | 0.822 |
SEL46066.1 | SEL50353.1 | SAMN05421740_105315 | SAMN05421740_10661 | Magnesium chelatase family protein. | Putative endonuclease; Belongs to the UPF0102 family. | 0.767 |
SEL46383.1 | SEL49635.1 | SAMN05421740_105329 | SAMN05421740_10631 | N-acetylglucosamine-6-phosphate deacetylase. | comF family protein. | 0.626 |
SEL49635.1 | SEK72801.1 | SAMN05421740_10631 | SAMN05421740_102530 | comF family protein. | DNA processing protein. | 0.916 |
SEL49635.1 | SEK92523.1 | SAMN05421740_10631 | SAMN05421740_1032 | comF family protein. | Competence protein ComEC. | 0.904 |
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