Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEL59946.1 | SEL60507.1 | SAMN05421740_107135 | SAMN05421740_107161 | Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | 0.410 |
SEL60507.1 | SEL59946.1 | SAMN05421740_107161 | SAMN05421740_107135 | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | 0.410 |
SEL60507.1 | SEL60534.1 | SAMN05421740_107161 | SAMN05421740_107162 | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | Hypothetical protein. | 0.924 |
SEL60507.1 | SEL60550.1 | SAMN05421740_107161 | SAMN05421740_107163 | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | YceI-like domain-containing protein. | 0.886 |
SEL60507.1 | SEL69639.1 | SAMN05421740_107161 | SAMN05421740_108191 | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | Hypothetical protein. | 0.404 |
SEL60507.1 | SEL72495.1 | SAMN05421740_107161 | SAMN05421740_1098 | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | Starch-binding associating with outer membrane. | 0.598 |
SEL60507.1 | SEL72522.1 | SAMN05421740_107161 | SAMN05421740_1099 | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | TonB-linked outer membrane protein, SusC/RagA family. | 0.449 |
SEL60507.1 | SEL89098.1 | SAMN05421740_107161 | SAMN05421740_112133 | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | RagB/SusD domain-containing protein. | 0.500 |
SEL60507.1 | SEL96130.1 | SAMN05421740_107161 | SAMN05421740_11563 | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | SatD family (SatD). | 0.438 |
SEL60534.1 | SEL60507.1 | SAMN05421740_107162 | SAMN05421740_107161 | Hypothetical protein. | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | 0.924 |
SEL60534.1 | SEL60550.1 | SAMN05421740_107162 | SAMN05421740_107163 | Hypothetical protein. | YceI-like domain-containing protein. | 0.907 |
SEL60534.1 | SEL72495.1 | SAMN05421740_107162 | SAMN05421740_1098 | Hypothetical protein. | Starch-binding associating with outer membrane. | 0.634 |
SEL60534.1 | SEL72522.1 | SAMN05421740_107162 | SAMN05421740_1099 | Hypothetical protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.519 |
SEL60534.1 | SEL89098.1 | SAMN05421740_107162 | SAMN05421740_112133 | Hypothetical protein. | RagB/SusD domain-containing protein. | 0.482 |
SEL60534.1 | SEL96130.1 | SAMN05421740_107162 | SAMN05421740_11563 | Hypothetical protein. | SatD family (SatD). | 0.462 |
SEL60550.1 | SEL60507.1 | SAMN05421740_107163 | SAMN05421740_107161 | YceI-like domain-containing protein. | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | 0.886 |
SEL60550.1 | SEL60534.1 | SAMN05421740_107163 | SAMN05421740_107162 | YceI-like domain-containing protein. | Hypothetical protein. | 0.907 |
SEL60550.1 | SEL72495.1 | SAMN05421740_107163 | SAMN05421740_1098 | YceI-like domain-containing protein. | Starch-binding associating with outer membrane. | 0.603 |
SEL60550.1 | SEL72522.1 | SAMN05421740_107163 | SAMN05421740_1099 | YceI-like domain-containing protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.449 |
SEL60550.1 | SEL96130.1 | SAMN05421740_107163 | SAMN05421740_11563 | YceI-like domain-containing protein. | SatD family (SatD). | 0.402 |
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