Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK72465.1 | SEK72509.1 | SAMN05421740_102522 | SAMN05421740_102523 | Glutamate synthase (NADH) large subunit. | Glutamate synthase (NADH) small subunit. | 0.999 |
SEK72465.1 | SEK72946.1 | SAMN05421740_102522 | SAMN05421740_102534 | Glutamate synthase (NADH) large subunit. | DNA-binding transcriptional regulator, MerR family. | 0.906 |
SEK72465.1 | SEK97350.1 | SAMN05421740_102522 | SAMN05421740_103142 | Glutamate synthase (NADH) large subunit. | Glutamine synthetase. | 0.969 |
SEK72465.1 | SEL50797.1 | SAMN05421740_102522 | SAMN05421740_10681 | Glutamate synthase (NADH) large subunit. | Arginase family enzyme; Belongs to the arginase family. | 0.911 |
SEK72465.1 | SEL58379.1 | SAMN05421740_102522 | SAMN05421740_10753 | Glutamate synthase (NADH) large subunit. | Putative glutamine amidotransferase. | 0.899 |
SEK72465.1 | SEL58400.1 | SAMN05421740_102522 | SAMN05421740_10754 | Glutamate synthase (NADH) large subunit. | Alcohol dehydrogenase, class IV. | 0.863 |
SEK72465.1 | SEL58412.1 | SAMN05421740_102522 | SAMN05421740_10755 | Glutamate synthase (NADH) large subunit. | Glutamine synthetase. | 0.990 |
SEK72465.1 | carA | SAMN05421740_102522 | SAMN05421740_111124 | Glutamate synthase (NADH) large subunit. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.944 |
SEK72465.1 | gcvP | SAMN05421740_102522 | SAMN05421740_10655 | Glutamate synthase (NADH) large subunit. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.944 |
SEK72465.1 | glmS | SAMN05421740_102522 | SAMN05421740_101108 | Glutamate synthase (NADH) large subunit. | Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.966 |
SEK72509.1 | SEK72465.1 | SAMN05421740_102523 | SAMN05421740_102522 | Glutamate synthase (NADH) small subunit. | Glutamate synthase (NADH) large subunit. | 0.999 |
SEK72509.1 | SEK72946.1 | SAMN05421740_102523 | SAMN05421740_102534 | Glutamate synthase (NADH) small subunit. | DNA-binding transcriptional regulator, MerR family. | 0.550 |
SEK72509.1 | SEK97350.1 | SAMN05421740_102523 | SAMN05421740_103142 | Glutamate synthase (NADH) small subunit. | Glutamine synthetase. | 0.930 |
SEK72509.1 | SEL50797.1 | SAMN05421740_102523 | SAMN05421740_10681 | Glutamate synthase (NADH) small subunit. | Arginase family enzyme; Belongs to the arginase family. | 0.846 |
SEK72509.1 | SEL58400.1 | SAMN05421740_102523 | SAMN05421740_10754 | Glutamate synthase (NADH) small subunit. | Alcohol dehydrogenase, class IV. | 0.584 |
SEK72509.1 | SEL58412.1 | SAMN05421740_102523 | SAMN05421740_10755 | Glutamate synthase (NADH) small subunit. | Glutamine synthetase. | 0.948 |
SEK72509.1 | carA | SAMN05421740_102523 | SAMN05421740_111124 | Glutamate synthase (NADH) small subunit. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.848 |
SEK72509.1 | gcvP | SAMN05421740_102523 | SAMN05421740_10655 | Glutamate synthase (NADH) small subunit. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.853 |
SEK72509.1 | glmS | SAMN05421740_102523 | SAMN05421740_101108 | Glutamate synthase (NADH) small subunit. | Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.859 |
SEK72946.1 | SEK72465.1 | SAMN05421740_102534 | SAMN05421740_102522 | DNA-binding transcriptional regulator, MerR family. | Glutamate synthase (NADH) large subunit. | 0.906 |
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