STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL69206.1Hypothetical protein. (311 aa)    
Predicted Functional Partners:
SEL69202.1
3-oxoacyl-[acyl-carrier-protein] synthase-3.
 
  
 0.953
SEL69172.1
3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase.
 
    0.950
SEL69118.1
Butirosin biosynthesis protein H, N-terminal.
 
     0.918
SEL69131.1
Cro/C1-type HTH DNA-binding domain-containing protein.
 
     0.918
SEL69152.1
Hypothetical protein.
 
     0.915
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
 
    0.907
SEL69227.1
Predicted acyltransferase, LPLAT superfamily.
 
     0.904
SEL69312.1
WG containing repeat-containing protein.
 
     0.853
SEL68814.1
Hypothetical protein.
 
   
 0.821
SEL69269.1
3-oxoacyl-[acyl-carrier-protein] synthase-1; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
    0.798
Your Current Organism:
Parapedobacter koreensis
NCBI taxonomy Id: 332977
Other names: KCTC 12643, LMG 23493, LMG:23493, P. koreensis, Parapedobacter koreensis Kim et al. 2007, Pedobacter sp. WPCB189, strain Jip14
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