STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL83212.1NADPH:quinone reductase. (325 aa)    
Predicted Functional Partners:
SEL83229.1
AraC-type DNA-binding protein.
       0.709
SEL60622.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.702
SEL83004.1
Alcohol dehydrogenase.
 
  
 0.655
SEL67542.1
Allosteric NADP-dependent malic enzyme.
    
 0.588
SEL83195.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
  0.577
SEK92784.1
L-iditol 2-dehydrogenase.
  
  
 0.515
SEL83175.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
  0.496
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
    
 0.446
SEK22083.1
2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
  
  
 0.439
SEL97223.1
2-hydroxy-3-oxopropionate reductase.
  
  
  0.438
Your Current Organism:
Parapedobacter koreensis
NCBI taxonomy Id: 332977
Other names: KCTC 12643, LMG 23493, LMG:23493, P. koreensis, Parapedobacter koreensis Kim et al. 2007, Pedobacter sp. WPCB189, strain Jip14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.