Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK40984.1 | SEL49884.1 | SAMN05421740_101787 | SAMN05421740_10640 | Concanavalin A-like lectin/glucanases superfamily protein. | Aspartyl protease. | 0.516 |
SEK40984.1 | SEL83897.1 | SAMN05421740_101787 | SAMN05421740_11156 | Concanavalin A-like lectin/glucanases superfamily protein. | Outer membrane protein beta-barrel family protein. | 0.523 |
SEK67827.1 | SEL83862.1 | SAMN05421740_102412 | SAMN05421740_11154 | Outer membrane transport energization protein TonB. | Hypothetical protein. | 0.444 |
SEK67827.1 | SEL83897.1 | SAMN05421740_102412 | SAMN05421740_11156 | Outer membrane transport energization protein TonB. | Outer membrane protein beta-barrel family protein. | 0.444 |
SEK78576.1 | SEL51742.1 | SAMN05421740_102689 | SAMN05421740_106124 | Outer membrane receptor for ferrienterochelin and colicins. | Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.487 |
SEK78576.1 | SEL62092.1 | SAMN05421740_102689 | SAMN05421740_107230 | Outer membrane receptor for ferrienterochelin and colicins. | Protein TonB. | 0.517 |
SEK78576.1 | SEL83897.1 | SAMN05421740_102689 | SAMN05421740_11156 | Outer membrane receptor for ferrienterochelin and colicins. | Outer membrane protein beta-barrel family protein. | 0.570 |
SEL05745.1 | SEL49884.1 | SAMN05421740_103351 | SAMN05421740_10640 | Ketosteroid isomerase homolog. | Aspartyl protease. | 0.482 |
SEL05745.1 | SEL83897.1 | SAMN05421740_103351 | SAMN05421740_11156 | Ketosteroid isomerase homolog. | Outer membrane protein beta-barrel family protein. | 0.471 |
SEL49884.1 | SEK40984.1 | SAMN05421740_10640 | SAMN05421740_101787 | Aspartyl protease. | Concanavalin A-like lectin/glucanases superfamily protein. | 0.516 |
SEL49884.1 | SEL05745.1 | SAMN05421740_10640 | SAMN05421740_103351 | Aspartyl protease. | Ketosteroid isomerase homolog. | 0.482 |
SEL49884.1 | SEL83897.1 | SAMN05421740_10640 | SAMN05421740_11156 | Aspartyl protease. | Outer membrane protein beta-barrel family protein. | 0.609 |
SEL51742.1 | SEK78576.1 | SAMN05421740_106124 | SAMN05421740_102689 | Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Outer membrane receptor for ferrienterochelin and colicins. | 0.487 |
SEL51742.1 | SEL83862.1 | SAMN05421740_106124 | SAMN05421740_11154 | Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Hypothetical protein. | 0.444 |
SEL51742.1 | SEL83897.1 | SAMN05421740_106124 | SAMN05421740_11156 | Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Outer membrane protein beta-barrel family protein. | 0.444 |
SEL62092.1 | SEK78576.1 | SAMN05421740_107230 | SAMN05421740_102689 | Protein TonB. | Outer membrane receptor for ferrienterochelin and colicins. | 0.517 |
SEL62092.1 | SEL83862.1 | SAMN05421740_107230 | SAMN05421740_11154 | Protein TonB. | Hypothetical protein. | 0.444 |
SEL62092.1 | SEL83897.1 | SAMN05421740_107230 | SAMN05421740_11156 | Protein TonB. | Outer membrane protein beta-barrel family protein. | 0.531 |
SEL83862.1 | SEK67827.1 | SAMN05421740_11154 | SAMN05421740_102412 | Hypothetical protein. | Outer membrane transport energization protein TonB. | 0.444 |
SEL83862.1 | SEL51742.1 | SAMN05421740_11154 | SAMN05421740_106124 | Hypothetical protein. | Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.444 |
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