Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA45127.1 | SFA45131.1 | SAMN04488511_1051 | SAMN04488511_1052 | Hydroxypyruvate isomerase. | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.843 |
SFA45127.1 | SFA45135.1 | SAMN04488511_1051 | SAMN04488511_1053 | Hydroxypyruvate isomerase. | Tat (twin-arginine translocation) pathway signal sequence. | 0.948 |
SFA45127.1 | SFA45139.1 | SAMN04488511_1051 | SAMN04488511_1054 | Hydroxypyruvate isomerase. | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | 0.887 |
SFA45131.1 | SFA45127.1 | SAMN04488511_1052 | SAMN04488511_1051 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Hydroxypyruvate isomerase. | 0.843 |
SFA45131.1 | SFA45135.1 | SAMN04488511_1052 | SAMN04488511_1053 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Tat (twin-arginine translocation) pathway signal sequence. | 0.863 |
SFA45131.1 | SFA45139.1 | SAMN04488511_1052 | SAMN04488511_1054 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | 0.822 |
SFA45131.1 | SFA55719.1 | SAMN04488511_1052 | SAMN04488511_11528 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Hypothetical protein. | 0.446 |
SFA45135.1 | SFA45127.1 | SAMN04488511_1053 | SAMN04488511_1051 | Tat (twin-arginine translocation) pathway signal sequence. | Hydroxypyruvate isomerase. | 0.948 |
SFA45135.1 | SFA45131.1 | SAMN04488511_1053 | SAMN04488511_1052 | Tat (twin-arginine translocation) pathway signal sequence. | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.863 |
SFA45135.1 | SFA45139.1 | SAMN04488511_1053 | SAMN04488511_1054 | Tat (twin-arginine translocation) pathway signal sequence. | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | 0.923 |
SFA45139.1 | SFA45127.1 | SAMN04488511_1054 | SAMN04488511_1051 | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | Hydroxypyruvate isomerase. | 0.887 |
SFA45139.1 | SFA45131.1 | SAMN04488511_1054 | SAMN04488511_1052 | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.822 |
SFA45139.1 | SFA45135.1 | SAMN04488511_1054 | SAMN04488511_1053 | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | Tat (twin-arginine translocation) pathway signal sequence. | 0.923 |
SFA55719.1 | SFA45131.1 | SAMN04488511_11528 | SAMN04488511_1052 | Hypothetical protein. | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.446 |