STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA47691.1Thioredoxin. (172 aa)    
Predicted Functional Partners:
nhaA
Sodium/proton antiporter, NhaA family; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.
 
     0.911
SFA47687.1
Peroxiredoxin.
  
    0.799
SFA47680.1
Protein of unknown function DUF58.
       0.618
groL
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
  
 
 
 0.448
SFA40728.1
Protein of unknown function, DUF255.
  
 
 0.442
SFA43486.1
Thiol:disulfide interchange protein DsbD.
  
 
 0.442
SFA43490.1
Disulphide bond corrector protein DsbC.
  
 
 0.442
SFA53323.1
Disulphide bond corrector protein DsbC.
  
 
 0.442
SFA53491.1
Disulphide bond corrector protein DsbC.
  
 
 0.442
SFA53496.1
Thiol:disulfide interchange protein DsbD.
  
 
 0.442
Your Current Organism:
Pedobacter suwonensis
NCBI taxonomy Id: 332999
Other names: DSM 18130, KACC 11317, P. suwonensis, Pedobacter suwonensis Kwon et al. 2007, strain 15-52
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.