STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA46646.1Two component transcriptional regulator, LuxR family. (273 aa)    
Predicted Functional Partners:
SFA46649.1
Two component regulator propeller.
   0.997
SFA49744.1
PAS domain S-box-containing protein.
 0.968
SFA49427.1
Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.
 
  0.956
SFA60642.1
PAS domain S-box-containing protein.
 0.954
SFA38314.1
PAS domain S-box-containing protein.
0.948
SFA55419.1
Hpt domain-containing protein.
  
 0.946
SFA45639.1
PAS domain S-box-containing protein.
 0.943
SFA38823.1
PAS domain S-box-containing protein.
  0.937
SFA60632.1
PAS domain S-box-containing protein.
  
0.912
SFA49386.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
  0.891
Your Current Organism:
Pedobacter suwonensis
NCBI taxonomy Id: 332999
Other names: DSM 18130, KACC 11317, P. suwonensis, Pedobacter suwonensis Kwon et al. 2007, strain 15-52
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.