Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA37799.1 | SFA52765.1 | SAMN04488511_10119 | SAMN04488511_111123 | WbqC-like protein family protein. | ATP synthase F1 subcomplex epsilon subunit. | 0.993 |
SFA37799.1 | SFA53462.1 | SAMN04488511_10119 | SAMN04488511_11263 | WbqC-like protein family protein. | ABC-2 type transport system ATP-binding protein. | 0.464 |
SFA37799.1 | atpA | SAMN04488511_10119 | SAMN04488511_107216 | WbqC-like protein family protein. | F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.993 |
SFA37799.1 | atpD | SAMN04488511_10119 | SAMN04488511_111122 | WbqC-like protein family protein. | ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.992 |
SFA52765.1 | SFA37799.1 | SAMN04488511_111123 | SAMN04488511_10119 | ATP synthase F1 subcomplex epsilon subunit. | WbqC-like protein family protein. | 0.993 |
SFA52765.1 | SFA53462.1 | SAMN04488511_111123 | SAMN04488511_11263 | ATP synthase F1 subcomplex epsilon subunit. | ABC-2 type transport system ATP-binding protein. | 0.521 |
SFA52765.1 | atpA | SAMN04488511_111123 | SAMN04488511_107216 | ATP synthase F1 subcomplex epsilon subunit. | F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.999 |
SFA52765.1 | atpD | SAMN04488511_111123 | SAMN04488511_111122 | ATP synthase F1 subcomplex epsilon subunit. | ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.999 |
SFA53462.1 | SFA37799.1 | SAMN04488511_11263 | SAMN04488511_10119 | ABC-2 type transport system ATP-binding protein. | WbqC-like protein family protein. | 0.464 |
SFA53462.1 | SFA52765.1 | SAMN04488511_11263 | SAMN04488511_111123 | ABC-2 type transport system ATP-binding protein. | ATP synthase F1 subcomplex epsilon subunit. | 0.521 |
SFA53462.1 | SFA53465.1 | SAMN04488511_11263 | SAMN04488511_11264 | ABC-2 type transport system ATP-binding protein. | Iron complex outermembrane recepter protein. | 0.919 |
SFA53462.1 | SFA53472.1 | SAMN04488511_11263 | SAMN04488511_11265 | ABC-2 type transport system ATP-binding protein. | ABC-2 type transport system permease protein. | 0.983 |
SFA53462.1 | SFA53475.1 | SAMN04488511_11263 | SAMN04488511_11266 | ABC-2 type transport system ATP-binding protein. | ABC-2 type transport system permease protein. | 0.967 |
SFA53462.1 | SFA56055.1 | SAMN04488511_11263 | SAMN04488511_115110 | ABC-2 type transport system ATP-binding protein. | ABC-2 type transport system permease protein. | 0.516 |
SFA53462.1 | SFA57912.1 | SAMN04488511_11263 | SAMN04488511_11852 | ABC-2 type transport system ATP-binding protein. | ABC-2 type transport system permease protein. | 0.639 |
SFA53462.1 | SFA60311.1 | SAMN04488511_11263 | SAMN04488511_12721 | ABC-2 type transport system ATP-binding protein. | ABC-2 type transport system permease protein. | 0.639 |
SFA53462.1 | atpA | SAMN04488511_11263 | SAMN04488511_107216 | ABC-2 type transport system ATP-binding protein. | F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.531 |
SFA53462.1 | atpD | SAMN04488511_11263 | SAMN04488511_111122 | ABC-2 type transport system ATP-binding protein. | ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.533 |
SFA53465.1 | SFA53462.1 | SAMN04488511_11264 | SAMN04488511_11263 | Iron complex outermembrane recepter protein. | ABC-2 type transport system ATP-binding protein. | 0.919 |
SFA53465.1 | SFA53472.1 | SAMN04488511_11264 | SAMN04488511_11265 | Iron complex outermembrane recepter protein. | ABC-2 type transport system permease protein. | 0.955 |
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