STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DUI87_32325WD_REPEATS_REGION domain-containing protein. (425 aa)    
Predicted Functional Partners:
DUI87_26357
Uncharacterized protein.
   
 0.998
DUI87_24803
ARID domain-containing protein.
   
 0.998
DUI87_10280
Uncharacterized protein.
   
 0.998
DUI87_08783
CRC domain-containing protein.
   
 0.995
DUI87_23223
Uncharacterized protein.
   
 0.994
DUI87_28315
VEFS-Box domain-containing protein.
    
 0.992
DUI87_27723
Uncharacterized protein.
   
 0.992
DUI87_16956
WD_REPEATS_REGION domain-containing protein.
    
 0.990
DUI87_20469
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.989
DUI87_28980
MRG domain-containing protein.
   
 0.986
Your Current Organism:
Hirundo rustica
NCBI taxonomy Id: 333673
Other names: H. rustica rustica, Hirundo rustica rustica
Server load: low (12%) [HD]