STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DUI87_29717Uncharacterized protein. (416 aa)    
Predicted Functional Partners:
DUI87_15852
Uncharacterized protein.
    
   0.848
DUI87_11692
Uncharacterized protein.
    
  0.594
DUI87_03581
Ribosomal_L7Ae domain-containing protein.
    
 
 0.548
DUI87_07353
DDE-1 domain-containing protein.
      
 0.505
DUI87_12567
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.484
DUI87_13956
Uncharacterized protein.
    
 0.482
DUI87_04338
Small ubiquitin-related modifier.
   
  0.462
DUI87_00430
ThiF domain-containing protein.
    
 0.461
DUI87_00058
ThiF domain-containing protein.
    
 0.461
DUI87_26934
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.459
Your Current Organism:
Hirundo rustica
NCBI taxonomy Id: 333673
Other names: H. rustica rustica, Hirundo rustica rustica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.