STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DUI87_25294Collagen IV NC1 domain-containing protein. (1627 aa)    
Predicted Functional Partners:
DUI87_18001
Integrin beta; Belongs to the integrin beta chain family.
    
 0.920
DUI87_28115
VWFA domain-containing protein; Belongs to the integrin alpha chain family.
    
 0.917
DUI87_04256
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
    
 0.916
DUI87_28117
VWFA domain-containing protein; Belongs to the integrin alpha chain family.
    
 0.914
DUI87_18277
Integrin beta; Belongs to the integrin beta chain family.
    
 0.913
DUI87_31979
C1q domain-containing protein.
  
 
 
0.845
DUI87_18748
Integrin_alpha2 domain-containing protein.
    
 0.827
DUI87_18754
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
    
 0.827
DUI87_18757
Uncharacterized protein.
    
 0.827
DUI87_18750
Integrin_alpha2 domain-containing protein.
    
 0.827
Your Current Organism:
Hirundo rustica
NCBI taxonomy Id: 333673
Other names: H. rustica rustica, Hirundo rustica rustica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.