DUI87_22052 protein (Hirundo rustica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DUI87_22052

ACB domain-containing protein. (320 aa)

Predicted Functional Partners:

DUI87_31790

0.848

DUI87_17880

0.845

DUI87_28865

0.844

DUI87_16792

0.844

DUI87_10480

0.844

DUI87_00716

0.844

DUI87_06658

0.842

DUI87_15445

0.825

DUI87_27978

0.822

DUI87_10401

0.815

Your Current Organism:

Hirundo rustica

NCBI taxonomy Id: 333673
Other names: H. rustica rustica, Hirundo rustica rustica

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DUI87_00716	DUI87_06658	A0A3M0L9X8	A0A3M0KUG8	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.800
DUI87_00716	DUI87_15445	A0A3M0L9X8	A0A3M0K435	Uncharacterized protein.	SH3 domain-containing protein.	0.756
DUI87_00716	DUI87_17880	A0A3M0L9X8	A0A3M0K0H8	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.732
DUI87_00716	DUI87_22052	A0A3M0L9X8	A0A3M0JMT2	Uncharacterized protein.	ACB domain-containing protein.	0.844
DUI87_00716	DUI87_28865	A0A3M0L9X8	A0A3M0J2T5	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.744
DUI87_00716	DUI87_31790	A0A3M0L9X8	A0A3M0IQ35	Uncharacterized protein.	Pex14_N domain-containing protein.	0.623
DUI87_06658	DUI87_00716	A0A3M0KUG8	A0A3M0L9X8	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.800
DUI87_06658	DUI87_10480	A0A3M0KUG8	A0A3M0KIQ4	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.962
DUI87_06658	DUI87_15445	A0A3M0KUG8	A0A3M0K435	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	SH3 domain-containing protein.	0.756
DUI87_06658	DUI87_16792	A0A3M0KUG8	A0A3M0K2F8	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.969
DUI87_06658	DUI87_17880	A0A3M0KUG8	A0A3M0K0H8	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.954
DUI87_06658	DUI87_22052	A0A3M0KUG8	A0A3M0JMT2	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	ACB domain-containing protein.	0.842
DUI87_06658	DUI87_28865	A0A3M0KUG8	A0A3M0J2T5	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.982
DUI87_06658	DUI87_31790	A0A3M0KUG8	A0A3M0IQ35	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Pex14_N domain-containing protein.	0.623
DUI87_10401	DUI87_15445	A0A3M0KIJ4	A0A3M0K435	Uncharacterized protein.	SH3 domain-containing protein.	0.993
DUI87_10401	DUI87_17880	A0A3M0KIJ4	A0A3M0K0H8	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.527
DUI87_10401	DUI87_22052	A0A3M0KIJ4	A0A3M0JMT2	Uncharacterized protein.	ACB domain-containing protein.	0.815
DUI87_10401	DUI87_31790	A0A3M0KIJ4	A0A3M0IQ35	Uncharacterized protein.	Pex14_N domain-containing protein.	0.956
DUI87_10480	DUI87_06658	A0A3M0KIQ4	A0A3M0KUG8	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.962
DUI87_10480	DUI87_15445	A0A3M0KIQ4	A0A3M0K435	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	SH3 domain-containing protein.	0.756