DUI87_19741 protein (Hirundo rustica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DUI87_19741

Olfactory receptor. (310 aa)

Predicted Functional Partners:

DUI87_22151

0.708

DUI87_12485

0.708

DUI87_06669

0.708

DUI87_22667

0.625

DUI87_05224

0.625

DUI87_31862

0.536

DUI87_21145

0.536

DUI87_15259

0.530

DUI87_09941

0.530

DUI87_14781

0.505

Your Current Organism:

Hirundo rustica

NCBI taxonomy Id: 333673
Other names: H. rustica rustica, Hirundo rustica rustica

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DUI87_05224	DUI87_06669	A0A3M0KXY5	A0A3M0KSR6	G protein gamma domain-containing protein.	Uncharacterized protein.	0.950
DUI87_05224	DUI87_09941	A0A3M0KXY5	A0A3M0KH06	G protein gamma domain-containing protein.	Uncharacterized protein.	0.719
DUI87_05224	DUI87_12485	A0A3M0KXY5	A0A3M0KC46	G protein gamma domain-containing protein.	Uncharacterized protein.	0.950
DUI87_05224	DUI87_14781	A0A3M0KXY5	A0A3M0K5V8	G protein gamma domain-containing protein.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.809
DUI87_05224	DUI87_15259	A0A3M0KXY5	A0A3M0K9Q8	G protein gamma domain-containing protein.	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.719
DUI87_05224	DUI87_19741	A0A3M0KXY5	A0A3M0JRG0	G protein gamma domain-containing protein.	Olfactory receptor.	0.625
DUI87_05224	DUI87_21145	A0A3M0KXY5	A0A3M0JM15	G protein gamma domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.975
DUI87_05224	DUI87_22151	A0A3M0KXY5	A0A3M0JJR2	G protein gamma domain-containing protein.	Uncharacterized protein.	0.950
DUI87_05224	DUI87_22667	A0A3M0KXY5	A0A3M0JQF8	G protein gamma domain-containing protein.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.900
DUI87_05224	DUI87_31862	A0A3M0KXY5	A0A3M0IY31	G protein gamma domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.975
DUI87_06669	DUI87_05224	A0A3M0KSR6	A0A3M0KXY5	Uncharacterized protein.	G protein gamma domain-containing protein.	0.950
DUI87_06669	DUI87_09941	A0A3M0KSR6	A0A3M0KH06	Uncharacterized protein.	Uncharacterized protein.	0.936
DUI87_06669	DUI87_14781	A0A3M0KSR6	A0A3M0K5V8	Uncharacterized protein.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.605
DUI87_06669	DUI87_15259	A0A3M0KSR6	A0A3M0K9Q8	Uncharacterized protein.	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.936
DUI87_06669	DUI87_19741	A0A3M0KSR6	A0A3M0JRG0	Uncharacterized protein.	Olfactory receptor.	0.708
DUI87_06669	DUI87_21145	A0A3M0KSR6	A0A3M0JM15	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.971
DUI87_06669	DUI87_22667	A0A3M0KSR6	A0A3M0JQF8	Uncharacterized protein.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.950
DUI87_06669	DUI87_31862	A0A3M0KSR6	A0A3M0IY31	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.971
DUI87_09941	DUI87_05224	A0A3M0KH06	A0A3M0KXY5	Uncharacterized protein.	G protein gamma domain-containing protein.	0.719
DUI87_09941	DUI87_06669	A0A3M0KH06	A0A3M0KSR6	Uncharacterized protein.	Uncharacterized protein.	0.936