STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DUI87_20247Uncharacterized protein. (398 aa)    
Predicted Functional Partners:
DUI87_31849
Uncharacterized protein.
    
 
 0.874
DUI87_15250
Ribosomal_L2_C domain-containing protein.
   
 
 0.872
DUI87_05724
Uncharacterized protein.
   
 
 0.870
DUI87_30006
RRF domain-containing protein.
    
 
 0.869
DUI87_07117
Uncharacterized protein.
   
   0.864
DUI87_33483
Uncharacterized protein.
    
 
 0.858
DUI87_29113
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
    
 
 0.857
DUI87_12433
Ribosomal_L23eN domain-containing protein.
    
   0.856
DUI87_15681
Ribosomal_L2_C domain-containing protein.
   
 
 0.855
DUI87_31375
Ribosomal_S7 domain-containing protein.
    
 
 0.852
Your Current Organism:
Hirundo rustica
NCBI taxonomy Id: 333673
Other names: H. rustica rustica, Hirundo rustica rustica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.