STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DUI87_22003Keratin. (109 aa)    
Predicted Functional Partners:
DUI87_08808
Uncharacterized protein; Belongs to the RNA polymerase beta chain family.
   
 0.924
DUI87_29712
Uncharacterized protein.
    
 0.917
DUI87_22636
Uncharacterized protein.
    
 0.917
DUI87_21171
Uncharacterized protein.
    
 0.917
DUI87_21484
RPOL4c domain-containing protein.
    
 0.917
DUI87_20322
Uncharacterized protein.
    
 0.917
DUI87_14231
RPOLD domain-containing protein.
    
 0.917
DUI87_12533
Uncharacterized protein.
    
 0.917
DUI87_12632
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
    
 0.902
DUI87_14756
TFIIB-type domain-containing protein.
    
 0.898
Your Current Organism:
Hirundo rustica
NCBI taxonomy Id: 333673
Other names: H. rustica rustica, Hirundo rustica rustica
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