STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DUI87_14209E2F_TDP domain-containing protein. (440 aa)    
Predicted Functional Partners:
DUI87_16595
Uncharacterized protein.
   
 0.994
DUI87_27635
Uncharacterized protein.
   
 0.991
DUI87_14099
RB_B domain-containing protein.
   
 0.990
DUI87_14098
Uncharacterized protein.
   
 0.990
DUI87_32314
E2F_TDP domain-containing protein.
  
 
0.987
DUI87_21309
Uncharacterized protein; Belongs to the FGGY kinase family.
   
 0.987
DUI87_08425
E2F_TDP domain-containing protein.
  
 
0.986
DUI87_08783
CRC domain-containing protein.
   
 0.971
DUI87_29022
Mothers against decapentaplegic homolog.
    
 0.946
DUI87_06675
Mothers against decapentaplegic homolog.
    
 0.945
Your Current Organism:
Hirundo rustica
NCBI taxonomy Id: 333673
Other names: H. rustica rustica, Hirundo rustica rustica
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.