STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DUI87_13159Uncharacterized protein. (137 aa)    
Predicted Functional Partners:
DUI87_11665
Rab-GAP TBC domain-containing protein.
   
   0.925
DUI87_23427
CP-type G domain-containing protein.
   
   0.924
DUI87_21274
CP-type G domain-containing protein.
   
   0.924
DUI87_25477
PseudoU_synth_2 domain-containing protein.
    
 
 0.919
DUI87_10275
SpoU_methylase domain-containing protein.
   
 
 0.914
DUI87_32405
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
   0.908
DUI87_31613
PseudoU_synth_2 domain-containing protein.
    
 
 0.897
DUI87_24465
Uncharacterized protein.
    
 
 0.897
DUI87_12376
SpoU_sub_bind domain-containing protein.
   
 
 0.893
DUI87_07592
Ribosomal_L18e/L15P domain-containing protein.
   
   0.892
Your Current Organism:
Hirundo rustica
NCBI taxonomy Id: 333673
Other names: H. rustica rustica, Hirundo rustica rustica
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