STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DUI87_18587Uncharacterized protein. (395 aa)    
Predicted Functional Partners:
DUI87_31968
Fe2OG dioxygenase domain-containing protein.
   
0.947
DUI87_21248
P4Hc domain-containing protein.
   
0.940
DUI87_17071
Uncharacterized protein.
   
0.940
DUI87_29303
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.928
DUI87_26440
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.848
DUI87_30174
Fibrillar collagen NC1 domain-containing protein.
    
 0.752
DUI87_28175
Protein disulfide-isomerase.
    
 0.730
DUI87_21751
SERPIN domain-containing protein; Belongs to the serpin family.
   
 
 0.728
DUI87_11537
Uncharacterized protein.
    
 0.722
DUI87_29126
Uncharacterized protein.
   
 0.698
Your Current Organism:
Hirundo rustica
NCBI taxonomy Id: 333673
Other names: H. rustica rustica, Hirundo rustica rustica
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