STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DUI87_13215Uncharacterized protein. (1572 aa)    
Predicted Functional Partners:
DUI87_24686
Helicase ATP-binding domain-containing protein.
    
  0.865
DUI87_24688
Helicase C-terminal domain-containing protein.
    
  0.865
DUI87_31805
Uncharacterized protein.
     
 0.555
DUI87_23223
Uncharacterized protein.
    
 0.475
DUI87_08783
CRC domain-containing protein.
    
 0.472
DUI87_32325
WD_REPEATS_REGION domain-containing protein.
    
 0.454
DUI87_15849
Uncharacterized protein.
    
 0.454
DUI87_32270
RPA_C domain-containing protein.
    
 0.445
DUI87_14219
Uncharacterized protein.
    
  0.431
DUI87_12466
Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.
    
 0.407
Your Current Organism:
Hirundo rustica
NCBI taxonomy Id: 333673
Other names: H. rustica rustica, Hirundo rustica rustica
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