STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DUI87_03950Uncharacterized protein. (253 aa)    
Predicted Functional Partners:
DUI87_33104
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.857
DUI87_30803
Uncharacterized protein.
    
 0.725
DUI87_08316
Uncharacterized protein; Belongs to the complex I LYR family.
    
0.642
DUI87_16721
Uncharacterized protein.
   
   0.602
DUI87_22877
RAG2_PHD domain-containing protein.
    
 0.586
DUI87_33828
Ubiquitin-like domain-containing protein.
    
  0.559
DUI87_15250
Ribosomal_L2_C domain-containing protein.
   
 
 0.544
DUI87_07117
Uncharacterized protein.
   
   0.537
DUI87_15681
Ribosomal_L2_C domain-containing protein.
   
 
 0.498
DUI87_33765
Uncharacterized protein.
    
 0.496
Your Current Organism:
Hirundo rustica
NCBI taxonomy Id: 333673
Other names: H. rustica rustica, Hirundo rustica rustica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.