STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DUI87_00139Uncharacterized protein. (472 aa)    
Predicted Functional Partners:
DUI87_32079
Uncharacterized protein.
    
 0.977
DUI87_12473
MPN domain-containing protein.
   
 0.974
DUI87_33030
Uncharacterized protein.
   
 0.973
DUI87_22042
Tr-type G domain-containing protein.
    
 0.973
DUI87_20578
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
    
 0.973
DUI87_28941
MFAP1 domain-containing protein.
   
 0.972
DUI87_23112
RRM domain-containing protein.
   
 
 0.970
DUI87_30239
WD_REPEATS_REGION domain-containing protein.
    
 0.968
DUI87_26949
U1-type domain-containing protein.
    
 0.968
DUI87_32076
SNRNP27 domain-containing protein.
    
 0.967
Your Current Organism:
Hirundo rustica
NCBI taxonomy Id: 333673
Other names: H. rustica rustica, Hirundo rustica rustica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.