STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PotB_1Unannotated protein. (300 aa)    
Predicted Functional Partners:
CysW_1
Unannotated protein.
 
  0.999
C9446_01835
Unannotated protein.
 
 
  0.994
PotA_1
Unannotated protein; Belongs to the ABC transporter superfamily.
 
 
  0.994
C9446_01830
Unannotated protein.
 
    0.964
C9446_01810
Unannotated protein.
 
    0.795
YdcV
Unannotated protein.
 
   
0.560
phnV
Unannotated protein.
 
    0.548
nudC
Unannotated protein; Belongs to the Nudix hydrolase family. NudC subfamily.
       0.444
fbpC
Unannotated protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.
 
    0.405
Your Current Organism:
Providencia heimbachae
NCBI taxonomy Id: 333962
Other names: ATCC 35613, CCUG 16446, CDC 8025-83, CIP 103031, DSM 3591, NCTC 12003, P. heimbachae, strain MUA 2-110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.