Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CaiD | EtfA_2 | GCA_900061445_00892 | GCA_900061445_01546 | Unannotated protein; Belongs to the enoyl-CoA hydratase/isomerase family. | Unannotated protein. | 0.439 |
CaiD | EtfB_1 | GCA_900061445_00892 | GCA_900061445_00887 | Unannotated protein; Belongs to the enoyl-CoA hydratase/isomerase family. | Unannotated protein. | 0.566 |
CaiD | caiA | GCA_900061445_00892 | GCA_900061445_00889 | Unannotated protein; Belongs to the enoyl-CoA hydratase/isomerase family. | Unannotated protein; Catalyzes the reduction of crotonobetainyl-CoA to gamma- butyrobetainyl-CoA; Belongs to the acyl-CoA dehydrogenase family. | 0.963 |
CaiD | caiB | GCA_900061445_00892 | GCA_900061445_00890 | Unannotated protein; Belongs to the enoyl-CoA hydratase/isomerase family. | Unannotated protein; Catalyzes the reversible transfer of the CoA moiety from gamma-butyrobetainyl-CoA to L-carnitine to generate L-carnitinyl-CoA and gamma-butyrobetaine. Is also able to catalyze the reversible transfer of the CoA moiety from gamma-butyrobetainyl-CoA or L- carnitinyl-CoA to crotonobetaine to generate crotonobetainyl-CoA. Belongs to the CoA-transferase III family. CaiB subfamily. | 0.823 |
CaiD | fixB | GCA_900061445_00892 | GCA_900061445_00886 | Unannotated protein; Belongs to the enoyl-CoA hydratase/isomerase family. | Unannotated protein; Required for anaerobic carnitine reduction. May bring reductant to CaiA. | 0.586 |
EchA8_2 | EtfA_2 | GCA_900061445_00597 | GCA_900061445_01546 | Unannotated protein; Belongs to the enoyl-CoA hydratase/isomerase family. | Unannotated protein. | 0.491 |
EchA8_2 | EtfB_1 | GCA_900061445_00597 | GCA_900061445_00887 | Unannotated protein; Belongs to the enoyl-CoA hydratase/isomerase family. | Unannotated protein. | 0.434 |
EchA8_2 | EtfB_2 | GCA_900061445_00597 | GCA_900061445_01545 | Unannotated protein; Belongs to the enoyl-CoA hydratase/isomerase family. | Unannotated protein. | 0.448 |
EchA8_2 | FadB | GCA_900061445_00597 | GCA_900061445_00222 | Unannotated protein; Belongs to the enoyl-CoA hydratase/isomerase family. | Unannotated protein; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.935 |
EchA8_2 | FadJ | GCA_900061445_00597 | GCA_900061445_03146 | Unannotated protein; Belongs to the enoyl-CoA hydratase/isomerase family. | Unannotated protein; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities. Belongs to the enoyl-CoA hydratase/isomerase family. In the central section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | 0.935 |
EchA8_2 | caiA | GCA_900061445_00597 | GCA_900061445_00889 | Unannotated protein; Belongs to the enoyl-CoA hydratase/isomerase family. | Unannotated protein; Catalyzes the reduction of crotonobetainyl-CoA to gamma- butyrobetainyl-CoA; Belongs to the acyl-CoA dehydrogenase family. | 0.872 |
EchA8_2 | fixB | GCA_900061445_00597 | GCA_900061445_00886 | Unannotated protein; Belongs to the enoyl-CoA hydratase/isomerase family. | Unannotated protein; Required for anaerobic carnitine reduction. May bring reductant to CaiA. | 0.493 |
EtfA_2 | CaiD | GCA_900061445_01546 | GCA_900061445_00892 | Unannotated protein. | Unannotated protein; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.439 |
EtfA_2 | EchA8_2 | GCA_900061445_01546 | GCA_900061445_00597 | Unannotated protein. | Unannotated protein; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.491 |
EtfA_2 | EtfB_1 | GCA_900061445_01546 | GCA_900061445_00887 | Unannotated protein. | Unannotated protein. | 0.982 |
EtfA_2 | EtfB_2 | GCA_900061445_01546 | GCA_900061445_01545 | Unannotated protein. | Unannotated protein. | 0.999 |
EtfA_2 | FadB | GCA_900061445_01546 | GCA_900061445_00222 | Unannotated protein. | Unannotated protein; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.759 |
EtfA_2 | FadJ | GCA_900061445_01546 | GCA_900061445_03146 | Unannotated protein. | Unannotated protein; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities. Belongs to the enoyl-CoA hydratase/isomerase family. In the central section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | 0.723 |
EtfA_2 | caiA | GCA_900061445_01546 | GCA_900061445_00889 | Unannotated protein. | Unannotated protein; Catalyzes the reduction of crotonobetainyl-CoA to gamma- butyrobetainyl-CoA; Belongs to the acyl-CoA dehydrogenase family. | 0.955 |
EtfA_2 | nuoC | GCA_900061445_01546 | GCA_900061445_03094 | Unannotated protein. | Unannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family. | 0.741 |
page 1 of 4