Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AceB | FumB | GCA_900061445_00057 | GCA_900061445_01398 | Unannotated protein. | Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.938 |
AceB | MaeB | GCA_900061445_00057 | GCA_900061445_02883 | Unannotated protein. | Unannotated protein. | 0.976 |
AceB | fumC | GCA_900061445_00057 | GCA_900061445_02751 | Unannotated protein. | Unannotated protein; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.932 |
AceB | maeA | GCA_900061445_00057 | GCA_900061445_01955 | Unannotated protein. | Unannotated protein. | 0.916 |
AceB | mdh | GCA_900061445_00057 | GCA_900061445_01200 | Unannotated protein. | Unannotated protein; Catalyzes the reversible oxidation of malate to oxaloacetate. | 0.938 |
FrdA | FrdB | GCA_900061445_01514 | GCA_900061445_01513 | Unannotated protein. | Unannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.999 |
FrdA | FumB | GCA_900061445_01514 | GCA_900061445_01398 | Unannotated protein. | Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.992 |
FrdA | MaeB | GCA_900061445_01514 | GCA_900061445_02883 | Unannotated protein. | Unannotated protein. | 0.612 |
FrdA | SdhA | GCA_900061445_01514 | GCA_900061445_01866 | Unannotated protein. | Unannotated protein; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | 0.911 |
FrdA | SdhC | GCA_900061445_01514 | GCA_900061445_01864 | Unannotated protein. | Unannotated protein. | 0.997 |
FrdA | fumC | GCA_900061445_01514 | GCA_900061445_02751 | Unannotated protein. | Unannotated protein; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.973 |
FrdA | mdh | GCA_900061445_01514 | GCA_900061445_01200 | Unannotated protein. | Unannotated protein; Catalyzes the reversible oxidation of malate to oxaloacetate. | 0.676 |
FrdA | sdhB | GCA_900061445_01514 | GCA_900061445_01867 | Unannotated protein. | Unannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.998 |
FrdB | FrdA | GCA_900061445_01513 | GCA_900061445_01514 | Unannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Unannotated protein. | 0.999 |
FrdB | FumB | GCA_900061445_01513 | GCA_900061445_01398 | Unannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.986 |
FrdB | MaeB | GCA_900061445_01513 | GCA_900061445_02883 | Unannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Unannotated protein. | 0.435 |
FrdB | SdhA | GCA_900061445_01513 | GCA_900061445_01866 | Unannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Unannotated protein; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | 0.998 |
FrdB | SdhC | GCA_900061445_01513 | GCA_900061445_01864 | Unannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Unannotated protein. | 0.997 |
FrdB | fumC | GCA_900061445_01513 | GCA_900061445_02751 | Unannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Unannotated protein; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.950 |
FrdB | mdh | GCA_900061445_01513 | GCA_900061445_01200 | Unannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Unannotated protein; Catalyzes the reversible oxidation of malate to oxaloacetate. | 0.690 |
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