STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL35971.1Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. (486 aa)    
Predicted Functional Partners:
SFM37349.1
Glutamate synthase (NADPH/NADH) large chain.
  
 
 0.825
SFL37603.1
AMP-binding enzyme C-terminal domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.804
SFL35989.1
Methyl-accepting chemotaxis protein (MCP) signalling domain-containing protein.
  
    0.770
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
   
  0.768
SFM07957.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.763
SFL60751.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.760
SFM49979.1
PTS system, D-glucosamine-specific IIC component.
   
 
 0.754
SFL71790.1
PTS system, beta-glucosides-specific IIC component.
   
 
 0.753
SFL37484.1
Lichenysin synthetase C; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.711
SFM26184.1
Cytochrome P450 / NADPH-cytochrome P450 reductase.
   
 
 0.704
Your Current Organism:
Gracilibacillus orientalis
NCBI taxonomy Id: 334253
Other names: AS 1.4250, CCM 7326, CECT 7097, G. orientalis, Gracilibacillus orientalis Carrasco et al. 2006, Gracilibacillus sp. EJ-15, Gracilibacillus sp. XH-62, Gracilibacillus sp. XH-63, strain XH-63
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