STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL38855.1Hypothetical protein. (107 aa)    
Predicted Functional Partners:
SFL38883.1
Phage protein, HK97 gp10 family.
  
    0.940
SFL38833.1
Phage major tail protein, phi13 family.
  
    0.884
SFL38909.1
Phage head-tail adaptor, putative, SPP1 family.
       0.800
SFL38929.1
Uncharacterized phage protein (possible DNA packaging).
       0.800
SFL38746.1
Putative phage tail component, N-terminal domain-containing protein.
  
    0.790
SFL38814.1
Hypothetical protein.
       0.785
SFL38788.1
Hypothetical protein.
       0.757
SFL38770.1
Phage tail tape measure protein, TP901 family, core region.
       0.749
SFL38730.1
Phage minor structural protein, N-terminal region.
       0.683
SFL38959.1
Hypothetical protein.
       0.681
Your Current Organism:
Gracilibacillus orientalis
NCBI taxonomy Id: 334253
Other names: AS 1.4250, CCM 7326, CECT 7097, G. orientalis, Gracilibacillus orientalis Carrasco et al. 2006, Gracilibacillus sp. EJ-15, Gracilibacillus sp. XH-62, Gracilibacillus sp. XH-63, strain XH-63
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.