STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL39476.1DnaD and phage-associated domain-containing protein. (332 aa)    
Predicted Functional Partners:
SFL39457.1
Hypothetical protein.
       0.701
SFL39492.1
Prophage antirepressor.
  
    0.658
SFL39512.1
Hypothetical protein.
       0.500
SFL39534.1
Hypothetical protein.
       0.499
SFL39436.1
HNH endonuclease.
       0.492
SFL39402.1
DNA adenine methylase.
       0.485
SFL39417.1
Hypothetical protein.
       0.472
SFL39349.1
Hypothetical protein.
       0.460
SFL39366.1
Hypothetical protein.
       0.460
SFL39385.1
Hypothetical protein.
       0.460
Your Current Organism:
Gracilibacillus orientalis
NCBI taxonomy Id: 334253
Other names: AS 1.4250, CCM 7326, CECT 7097, G. orientalis, Gracilibacillus orientalis Carrasco et al. 2006, Gracilibacillus sp. EJ-15, Gracilibacillus sp. XH-62, Gracilibacillus sp. XH-63, strain XH-63
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.