STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL33944.1Glucosamine-6-phosphate deaminase. (245 aa)    
Predicted Functional Partners:
SFL42507.1
N-acetylglucosamine-6-phosphate deacetylase.
 0.983
SFL71790.1
PTS system, beta-glucosides-specific IIC component.
  
 
 0.877
SFM49979.1
PTS system, D-glucosamine-specific IIC component.
 
 
 0.877
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
  
 
 0.824
SFL42141.1
PTS system, N-acetylglucosamine-specific IIC component.
 
 0.789
SFL33960.1
Hypothetical protein.
       0.746
SFL33982.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
       0.746
SFL34000.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
       0.746
SFL56136.1
PTS system, sucrose-specific IIC component.
  
 
 0.745
SFL68655.1
PTS system, trehalose-specific IIC component.
  
 
 0.745
Your Current Organism:
Gracilibacillus orientalis
NCBI taxonomy Id: 334253
Other names: AS 1.4250, CCM 7326, CECT 7097, G. orientalis, Gracilibacillus orientalis Carrasco et al. 2006, Gracilibacillus sp. EJ-15, Gracilibacillus sp. XH-62, Gracilibacillus sp. XH-63, strain XH-63
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