STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL44845.1Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (80 aa)    
Predicted Functional Partners:
SFL71366.1
Serine/threonine protein kinase and signal transduction histidine kinase with GAF sensor.
   
 0.885
SFL86404.1
Signal transduction histidine kinase.
   
 0.829
SFL94026.1
Helix-turn-helix domain-containing protein.
   
 0.755
SFL57705.1
Methyl-accepting chemotaxis protein.
    
  0.648
SFL98000.1
Methyl-accepting chemotaxis protein.
    
  0.648
SFM45981.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.585
SFM32078.1
Two-component system, chemotaxis family, response regulator CheY.
   
 0.554
cheB
Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
   
 0.497
SFM31917.1
Two-component system, chemotaxis family, sensor kinase CheA.
     
 0.485
SFL44865.1
Pectate lyase.
       0.453
Your Current Organism:
Gracilibacillus orientalis
NCBI taxonomy Id: 334253
Other names: AS 1.4250, CCM 7326, CECT 7097, G. orientalis, Gracilibacillus orientalis Carrasco et al. 2006, Gracilibacillus sp. EJ-15, Gracilibacillus sp. XH-62, Gracilibacillus sp. XH-63, strain XH-63
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