STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL53609.1Transcriptional regulator, LacI family. (349 aa)    
Predicted Functional Partners:
SFL53637.1
4-O-beta-D-mannosyl-D-glucose phosphorylase; Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man-Glc) to mannose 1-phosphate (Man1P) and glucose; Belongs to the glycosyl hydrolase 130 family.
 
     0.799
SFL58221.1
DNA-binding transcriptional regulator, LacI/PurR family.
  
     0.766
SFL53657.1
Mannobiose 2-epimerase; Catalyzes the reversible epimerization of cellobiose to 4-O- beta-D-glucopyranosyl-D-mannose (Glc-Man).
 
     0.753
SFM37349.1
Glutamate synthase (NADPH/NADH) large chain.
    
 
 0.734
SFL71790.1
PTS system, beta-glucosides-specific IIC component.
    
 0.727
SFM49979.1
PTS system, D-glucosamine-specific IIC component.
    
 0.727
SFL37603.1
AMP-binding enzyme C-terminal domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
    
   0.722
SFL53588.1
Uncharacterized membrane protein YesL.
       0.594
SFL53570.1
ABC-type glycerol-3-phosphate transport system, substrate-binding protein.
  
     0.521
SFL46299.1
Fructokinase.
  
 
 0.478
Your Current Organism:
Gracilibacillus orientalis
NCBI taxonomy Id: 334253
Other names: AS 1.4250, CCM 7326, CECT 7097, G. orientalis, Gracilibacillus orientalis Carrasco et al. 2006, Gracilibacillus sp. EJ-15, Gracilibacillus sp. XH-62, Gracilibacillus sp. XH-63, strain XH-63
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