STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL54622.1Glycosyltransferase involved in cell wall bisynthesis. (372 aa)    
Predicted Functional Partners:
SFL54596.1
Helix-turn-helix.
 
 
  0.709
SFM25945.1
Galacturonosyltransferase.
 
     0.648
SFM25880.1
EpsG family protein.
 
    0.615
SFM25984.1
O-antigen biosynthesis protein WbqP.
 
  
 0.587
SFL37603.1
AMP-binding enzyme C-terminal domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.573
SFL37484.1
Lichenysin synthetase C; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.563
SFM25858.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.557
SFM25771.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
 
 0.466
SFL46299.1
Fructokinase.
  
 
 0.465
SFM25813.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
 
 0.458
Your Current Organism:
Gracilibacillus orientalis
NCBI taxonomy Id: 334253
Other names: AS 1.4250, CCM 7326, CECT 7097, G. orientalis, Gracilibacillus orientalis Carrasco et al. 2006, Gracilibacillus sp. EJ-15, Gracilibacillus sp. XH-62, Gracilibacillus sp. XH-63, strain XH-63
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