STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL55620.1Pimeloyl-ACP methyl ester carboxylesterase. (286 aa)    
Predicted Functional Partners:
SFL37603.1
AMP-binding enzyme C-terminal domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.891
SFL37484.1
Lichenysin synthetase C; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.855
SFL55643.1
Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding.
 
     0.775
SFL37620.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.728
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
   
  0.728
cinA
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
    
  0.724
SFM39591.1
Anthranilate synthase component 2.
    
 0.712
SFL66870.1
Glyoxalase family protein.
  
 
 0.700
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 0.695
SFL54210.1
HD domain-containing protein.
  
     0.574
Your Current Organism:
Gracilibacillus orientalis
NCBI taxonomy Id: 334253
Other names: AS 1.4250, CCM 7326, CECT 7097, G. orientalis, Gracilibacillus orientalis Carrasco et al. 2006, Gracilibacillus sp. EJ-15, Gracilibacillus sp. XH-62, Gracilibacillus sp. XH-63, strain XH-63
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