STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL55936.1iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (361 aa)    
Predicted Functional Partners:
SFL55960.1
iron(III) transport system permease protein.
  
  0.980
SFL55980.1
iron(III) transport system substrate-binding protein.
 
  0.940
SFL55325.1
Peptide/nickel transport system ATP-binding protein.
 
    
0.907
SFL70894.1
Putative phosphonate transport system ATP-binding protein.
 
    
0.898
SFL45478.1
iron(III) transport system permease protein.
 
  0.881
SFM11937.1
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
 0.876
SFL71868.1
Polar amino acid transport system permease protein.
 
  
 0.863
SFM44960.1
Putative ABC transport system permease protein.
 
 0.841
SFM49114.1
ABC-2 type transport system ATP-binding protein.
 
   
 
0.775
SFL45460.1
iron(III) transport system substrate-binding protein.
 
  0.759
Your Current Organism:
Gracilibacillus orientalis
NCBI taxonomy Id: 334253
Other names: AS 1.4250, CCM 7326, CECT 7097, G. orientalis, Gracilibacillus orientalis Carrasco et al. 2006, Gracilibacillus sp. EJ-15, Gracilibacillus sp. XH-62, Gracilibacillus sp. XH-63, strain XH-63
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