STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL58878.1Protein of unknown function. (1599 aa)    
Predicted Functional Partners:
SFL94045.1
Hypothetical protein.
 
 
  0.866
SFL43633.1
Hypothetical protein.
 
 
  0.865
SFL59740.1
Hypothetical protein.
  
 
  0.813
SFM43744.1
Hypothetical protein.
 
   
 0.773
SFL35525.1
Ig-like domain (group 4).
  
     0.744
SFM14136.1
Hypothetical protein.
  
     0.720
SFM42978.1
Glycosyl hydrolases family 2, TIM barrel domain; Belongs to the glycosyl hydrolase 2 family.
 
   
 0.719
SFL69363.1
Hypothetical protein.
  
     0.717
SFM07957.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.713
SFM08700.1
Hypothetical protein.
  
     0.711
Your Current Organism:
Gracilibacillus orientalis
NCBI taxonomy Id: 334253
Other names: AS 1.4250, CCM 7326, CECT 7097, G. orientalis, Gracilibacillus orientalis Carrasco et al. 2006, Gracilibacillus sp. EJ-15, Gracilibacillus sp. XH-62, Gracilibacillus sp. XH-63, strain XH-63
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.