STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxuAMannonate dehydratase; Catalyzes the dehydration of D-mannonate. (368 aa)    
Predicted Functional Partners:
SFL52468.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  0.978
uxaC
Glucuronate isomerase.
 
  
 0.968
SFL52450.1
2-dehydro-3-deoxygluconokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.928
SFL52519.1
Transcriptional regulator, GntR family.
 
   
 0.887
SFL52503.1
Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family.
     0.878
SFL47042.1
2-dehydro-3-deoxygluconokinase.
 
  
 0.876
SFL52432.1
2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase.
 
   
 0.819
SFM19434.1
2-dehydro-3-deoxygluconokinase.
 
  
 0.800
mtlD
Mannitol-1-phosphate 5-dehydrogenase.
  
 
 0.800
SFL52414.1
Xylan 1,4-beta-xylosidase.
 
     0.749
Your Current Organism:
Gracilibacillus orientalis
NCBI taxonomy Id: 334253
Other names: AS 1.4250, CCM 7326, CECT 7097, G. orientalis, Gracilibacillus orientalis Carrasco et al. 2006, Gracilibacillus sp. EJ-15, Gracilibacillus sp. XH-62, Gracilibacillus sp. XH-63, strain XH-63
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