STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL69106.1Predicted dehydrogenase. (328 aa)    
Predicted Functional Partners:
SFL69088.1
Sugar phosphate isomerase/epimerase.
 
 
  0.895
SFL69059.1
Predicted dehydrogenase.
 
    
0.795
SFL69152.1
Alpha-mannosidase.
  
    0.782
SFL69129.1
Predicted dehydrogenase.
       0.773
SFL69172.1
Beta-glucosidase.
       0.757
SFL43782.1
Oxidoreductase family, NAD-binding Rossmann fold.
  
     0.730
SFL52735.1
Predicted dehydrogenase.
  
     0.730
SFL69037.1
Beta-mannosidase; Belongs to the glycosyl hydrolase 2 family.
    
  0.728
iolE
2-keto-myo-inositol dehydratase; Catalyzes the dehydration of inosose (2-keto-myo-inositol, 2KMI or 2,4,6/3,5-pentahydroxycyclohexanone) to 3D-(3,5/4)- trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi-inositol).
 
 
  0.646
SFL69191.1
alpha-L-fucosidase.
       0.641
Your Current Organism:
Gracilibacillus orientalis
NCBI taxonomy Id: 334253
Other names: AS 1.4250, CCM 7326, CECT 7097, G. orientalis, Gracilibacillus orientalis Carrasco et al. 2006, Gracilibacillus sp. EJ-15, Gracilibacillus sp. XH-62, Gracilibacillus sp. XH-63, strain XH-63
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