STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL74059.1Two-component system, CitB family, sensor histidine kinase CitS. (532 aa)    
Predicted Functional Partners:
SFL74040.1
Two-component system, CitB family, response regulator CitT.
 0.995
SFL74027.1
Putative tricarboxylic transport membrane protein.
 
    0.874
SFL74005.1
Putative tricarboxylic transport membrane protein.
 
     0.808
SFL73986.1
Putative tricarboxylic transport membrane protein.
 
     0.805
SFL71366.1
Serine/threonine protein kinase and signal transduction histidine kinase with GAF sensor.
     
0.801
SFM32078.1
Two-component system, chemotaxis family, response regulator CheY.
     
 0.655
SFM13695.1
Two component transcriptional regulator, LytTR family.
 
  
 0.547
SFL57413.1
Signal transduction histidine kinase.
  
  
 0.530
SFL43022.1
HAMP domain-containing protein.
  
  
 0.522
SFL74214.1
Two-component system, OmpR family, sensor histidine kinase VicK.
  
  
0.476
Your Current Organism:
Gracilibacillus orientalis
NCBI taxonomy Id: 334253
Other names: AS 1.4250, CCM 7326, CECT 7097, G. orientalis, Gracilibacillus orientalis Carrasco et al. 2006, Gracilibacillus sp. EJ-15, Gracilibacillus sp. XH-62, Gracilibacillus sp. XH-63, strain XH-63
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