STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL74493.1Uncharacterized membrane protein YkvI. (336 aa)    
Predicted Functional Partners:
SFL82854.1
Stage III sporulation protein AE.
  
    0.735
SFL82896.1
Stage III sporulation protein AG.
  
    0.714
SFL74473.1
Hypothetical protein.
       0.683
SFM50394.1
Stage II sporulation protein E.
  
     0.660
SFL82836.1
Stage III sporulation protein AD.
  
    0.641
SFL97982.1
Uncharacterized protein YfkK, UPF0435 family.
  
     0.641
SFL81356.1
Similar to stage IV sporulation protein.
  
     0.628
SFM00307.1
Sporulation integral membrane protein YlbJ.
  
    0.618
SFL83798.1
Stage II sporulation protein M; Required for complete septum migration and engulfment of the forespore compartment during sporulation. Required for stabilizing and recruiting of SpoIIP to the septal membrane.
  
    0.614
SFL82790.1
Stage III sporulation protein AB.
  
    0.608
Your Current Organism:
Gracilibacillus orientalis
NCBI taxonomy Id: 334253
Other names: AS 1.4250, CCM 7326, CECT 7097, G. orientalis, Gracilibacillus orientalis Carrasco et al. 2006, Gracilibacillus sp. EJ-15, Gracilibacillus sp. XH-62, Gracilibacillus sp. XH-63, strain XH-63
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.