STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL82896.1Stage III sporulation protein AG. (214 aa)    
Predicted Functional Partners:
SFL82872.1
Stage III sporulation protein AF.
 
  
 0.987
SFL82922.1
Stage III sporulation protein AH.
 
  
 0.980
SFL82790.1
Stage III sporulation protein AB.
 
  
 0.968
SFL82769.1
Stage III sporulation protein AA.
 
  
 0.966
SFL82854.1
Stage III sporulation protein AE.
 
  
 0.965
SFL82836.1
Stage III sporulation protein AD.
 
  
 0.949
SFL82813.1
Stage III sporulation protein AC.
 
  
 0.943
SFM16196.1
Putative DeoR family transcriptional regulator, stage III sporulation protein D.
  
  
 0.812
SFL81004.1
Stage II sporulation protein P.
  
  
 0.802
SFM50394.1
Stage II sporulation protein E.
  
   
 0.800
Your Current Organism:
Gracilibacillus orientalis
NCBI taxonomy Id: 334253
Other names: AS 1.4250, CCM 7326, CECT 7097, G. orientalis, Gracilibacillus orientalis Carrasco et al. 2006, Gracilibacillus sp. EJ-15, Gracilibacillus sp. XH-62, Gracilibacillus sp. XH-63, strain XH-63
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.